EmbedBoundsMatrix( (AtomPairsParameters)boundsMatrix [, (int)maxIters=10 [, (bool)randomizeOnFailure=False [, (int)numZeroFail=2 [, (list)weights=[] [, (int)randomSeed=-1]]]]]) -> object :
Embed a bounds matrix and return the coordinates
ARGUMENTS:
- boundsMatrix: a square Numeric array of doubles containing the bounds matrix, this matrix
should already be smoothed
- maxIters: (optional) the maximum number of random distance matrices to try
- randomizeOnFailure: (optional) toggles using random coords if a matrix fails to embed
- numZeroFail: (optional) sets the number of zero eigenvalues to be considered a failure
- weights: (optional) a sequence of 3 sequences (i,j,weight) indicating elements of
the bounds matrix whose weights should be adjusted
- randomSeed: (optional) sets the random number seed used for embedding
RETURNS:
a Numeric array of doubles with the coordinates
C++ signature :
_object* EmbedBoundsMatrix(boost::python::api::object [,int=10 [,bool=False [,int=2 [,boost::python::list=[] [,int=-1]]]]])
|