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object --+ | ??.instance --+ | BitCorrMatGenerator
A class to generate a pariwise correlation matrix between a list of bits The mode of operation for this class is something like this >>> cmg = BitCorrMatGenerator() >>> cmg.SetBitList(blist) >>> for fp in fpList: >>> cmg.CollectVotes(fp) >>> corrMat = cmg.GetCorrMatrix() The resulting correlation matrix is a one dimensional nummeric array containing the lower triangle elements
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Inherited from Inherited from |
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__instance_size__ = 28
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CollectVotes( (BitCorrMatGenerator)arg1, (AtomPairsParameters)arg2) -> None : For each pair of on bits (bi, bj) in fp increase the correlation count for the pair by 1 ARGUMENTS: - fp : a bit vector to collect the fingerprints from C++ signature : void CollectVotes(RDInfoTheory::BitCorrMatGenerator*,boost::python::api::object) |
GetCorrMatrix( (BitCorrMatGenerator)arg1) -> object : Get the correlation matrix following the collection of votes from a bunch of fingerprints C++ signature : _object* GetCorrMatrix(RDInfoTheory::BitCorrMatGenerator*) |
SetBitList( (BitCorrMatGenerator)arg1, (AtomPairsParameters)arg2) -> None : Set the list of bits that need to be correllated This may for example be ther top ranking ensemble bits ARGUMENTS: - bitList : an integer list of bit IDs C++ signature : void SetBitList(RDInfoTheory::BitCorrMatGenerator*,boost::python::api::object) |
__init__( (object)arg1) -> None : C++ signature : void __init__(_object*)
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helper for pickle
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